Kathryn Lilley - Selected Publications#

Number of citations given for publications up and including 2020. Overall H-index 87 (Google Scholar)

1. Crook OM, Davies CTR, Breckels LM, Christopher JA, Gatto L, Kirk PDW, Lilley KS.

Inferring differential subcellular localisation in comparative spatial proteomics using BANDLE. (2022) Nature Communications,13(1):5948. doi: 10.1038/s41467-022-33570-9.

2. Kustatscher G, Collins T, Gingras AC, Guo T, Hermjakob H, Ideker T, Lilley KS, Lundberg E, Marcotte EM, Ralser M, Rappsilber J. An open invitation to the Understudied Proteins Initiative. (2022) Nature Biotechnology doi: 10.1038/s41587-022-01316-z.

3. Christopher JA, Stadler C, Martin CE, Morgenstern M, Pan Y, Betsinger CN, Rattray DG, Mahdessian D, Gingras AC, Warscheid B, Lehtiö J, Cristea IM, Foster LJ, Emili A, Lilley KS. Subcellular proteomics.(2021) Naure Rev Methods Primers. 1:32. doi: 10.1038/s43586-021-00029-y

4. Mulvey, CM, Breckels LM, Crook OM,, Sanders, DJ, Ribeiro, ALR, Geladaki, A, Christoforou, A, Kočevar Britovšek, N, Hurrell, T, Deery, MJ, Gatto, L, Smith, AM and Lilley, KS Spatiotemporal proteomic profiling of the pro-inflammatory response to lipopolysaccharide in the THP-1 human leukaemia cell line, (2021) Nature Communications, 10.1038/s41467-021-26000-9

5. Barylyuk K, Koreny L, Ke H, Butterworth S, Crook OM, Lassadi I, Gupta V, Tromer E, Mourier T, Stevens TJ, Breckels LM, Pain A, Lilley KS, Waller RF.A Comprehensive Subcellular Atlas of the Toxoplasma Proteome via hyperLOPIT Provides Spatial Context for Protein Functions. (2020) Cell Host Microbe. 28(5):752-766.e9. doi: 10.1016/j.chom.2020.09.011
(122 citations)

6. Demichev V, Messner CB, Vernardis SI, Lilley KS, Ralser M. DIA-NN: neural networks and interference correction enable deep proteome coverage in high throughput. (2020) Nat Methods. 17(1):41-44. doi: 10.1038/s41592-019-0638-x
(373 citations)

7. Queiroz RML, Smith T, Villanueva E, Marti-Solano M, Monti M, Pizzinga M, Mirea DM, Ramakrishna M, Harvey RF, Dezi V, Thomas GH, Willis AE, Lilley KS Comprehensive quantitation of RNA-protein interaction dynamics by orthogonal organic phase separation (OOPS), (2019) Nature Biotechnology doi:10.1038/s41587-018-0001-2
(185 citations)

8. Geladaki A, Kočevar Britovšek N, Breckels LM, Smith TS, Vennard OL, Mulvey CM, Crook OM, Gatto L, Lilley KS Combining LOPIT with differential ultracentrifugation for high-resolution spatial proteomics (2019). Nature Communications doi:10.1038/s41467-018-08191-w
(128 citations)

9. OM Crook, CM Mulvey, PDW Kirk, KS Lilley, L Gatto A Bayesian mixture modelling approach for spatial proteomics (2018) PLoS Computational Biology 14 (11), e1006516
(44 citations)

10. Thul PJ et al, Lilley KS, Uhlen, M and Lundberg E. A subcellular map of the human proteome. (2017) Science 356(6340). pii: eaal3321. doi: 10.1126/science.aal3321
(1971 citations)